BioGA - Bioinformatics Genetic Algorithm (BioGA)

Genetic algorithm are a class of optimization algorithms inspired by the process of natural selection and genetics. This package allows users to analyze and optimize high throughput genomic data using genetic algorithms. The functions provided are implemented in C++ for improved speed and efficiency, with an easy-to-use interface for use within R.

Last updated

experimentaldesigntechnologydata-analysisgene-expressiongenetic-algorithmsgenomicsoptimization-algorithmscpp

4.04 score 11 scripts 228 downloads

dormancy - Detection and Analysis of Dormant Patterns in Data

A novel framework for detecting, quantifying, and analyzing dormant patterns in multivariate data. Dormant patterns are statistical relationships that exist in data but remain inactive until specific trigger conditions emerge. This concept, inspired by biological dormancy (seeds, pathogens) and geological phenomena (dormant faults), provides tools to identify latent risks, hidden correlations, and potential phase transitions in complex systems. The package introduces methods for quantifying dormancy depth, trigger sensitivity, and awakening risk - enabling analysts to discover patterns that conventional methods miss because they focus only on currently active relationships.

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cpp

4.00 score 2 stars 3 scripts 510 downloads

genetic.algo.optimizeR - Genetic Algorithm Optimization

Genetic algorithm are a class of optimization algorithms inspired by the process of natural selection and genetics. This package is for learning purposes and allows users to optimize various functions or parameters by mimicking biological evolution processes such as selection, crossover, and mutation. Ideal for tasks like machine learning parameter tuning, mathematical function optimization, and solving an optimization problem that involves finding the best solution in a discrete space.

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experimentaldesigntechnology

4.00 score 10 scripts 565 downloads